Articles

Kawabe, H., Thomas, C.A., Hoshika, S. et al. Enzymatic synthesis and nanopore sequencing of 12-letter supernumerary DNA. Nat Commun 14, 6820 (2023). https://doi.org/10.1038/s41467-023-42406-z

Christopher A Thomas, Jonathan M Craig, Shuichi Hoshika, Henry Brinkerhoff, Jesse R Huang, Sarah J Abell, Michaela C Franzi, Jessica D Carrasco, Hyo-Joong Kim, Drew C Smith, Jens H Gundlach, Steven A Benner, Andrew H Laszlo. "Assessing Readability of an 8-letter expanded deoxyribonucleic acid alphabet with nanopores." Jour. Amer. Chem. Soc. April 2023. https://doi.org/10.1021/jacs.3c00829

Sinduja K Marx, Keith J Mickolajczyk, Jonathan M Craig, Christopher A Thomas, Akira M Pfeffer, Sarah J Abell, Jessica D Carrasco, Michaela C Franzi, Jesse R Huang, Hwanhee C Kim, Henry Brinkerhoff, Tarun M Kapoor, Jens H Gundlach, and Andrew H Laszlo. "Observing Inhibition of the SARS-CoV-2 helicase at single-nucleotide resolution." Nucleic Acids Research. August 2023. https://doi.org/10.1093/nar/gkad660.

A. H. Laszlo, J. M. Craig, M. Gavrilov, R. Tippana, I. C. Nova, J. R. Huang, H. C. Kim, S. J. Abell, M. deCampos-Stairiker, J. W. Mount, J. L. Bowman, K. S. Baker, H. Higinbotham, D. Bobrovnikov, T. Ha, J. H. Gundlach, Sequence-dependent mechanochemical coupling of helicase translocation and unwinding at single-nucleotide resolution. Proc. Natl. Acad. Sci. 119, e2202489119 (2022).

A. H. Laszlo, J. M. Craig, M. Gavrilov, R. Tippana, I. C. Nova, J. R. Huang, H. C. Kim, S. J. Abell, M. deCampos-Stairiker, J. W. Mount, J. L. Bowman, K. S. Baker, H. Higinbotham, D. Bobrovnikov, T. Ha, J. H. Gundlach, Sequence-dependent mechanochemical coupling of helicase translocation and unwinding at single-nucleotide resolution. Proc. Natl. Acad. Sci. 119, e2202489119 (2022).

Doty, C., Gallagher, S., Cui, W., Chen, W., Bhushan, S., Oostrom, M., Akers, S., and S.R. Spurgeon. “Design of a graphical user interface for few-shot machine learning-based classification of electron microscopy data.” Computational Materials Science. 203.15 (2022): 111121. DOI:10.1016/j.commatsci.2021.111121

L. V. Iliesiu and G. J. Turiaci, "The statistical mechanics of near-extremal black holes,'' JHEP 05, 145 (2021).

J. Kaidi, K. Ohmori, and Y. Zheng, “Kramers-Wannier-like Duality Defects in (3+1)D Gauge Theories,” Phys. Rev. Lett. 128 no. 11, (2022) 111601, arXiv:2111.01141
[hep-th].

Akers, S., Kautz, E., Trevino-Gavito, A., Olszta, M., Matthews, B., Wang, L., Du, Y., and S.R. Spurgeon. “Rapid and flexible segmentation of electron microscopy data using few-shot machine learning.“ npj Computational Materials. 7 (2021): 187. DOI:10.1038/s41524-021-00652-z

Matthews, B., Sassi, M., Barr, C., Ophus, C., Kaspar, T., Jiang, W., Hattar, K., and S.R. Spurgeon. “Percolation of ion-irradiation-induced disorder in complex oxide interfaces.” Nano Letters. 21.12 (2021): 5353–5359. DOI:10.1021/acs.nanolett.1c01651

Spurgeon, S.R., Ophus, C., Jones, L., Petford-Long, A., Kalinin, S.V., Olszta, M.J., Dunin-Borkowski, R., Salmon, N., Hattar, K., Yang, W-C.D., Sharma, R., Du, Y., Chiaramonti, A., Zheng, H., Buck, E.C., Kovarik, L., Penn, R.L., Li, D., Zhang, X., Murayama, M., and M.L. Taheri. “Towards data-driven next-generation transmission electron microscopy.” Nature Materials. 20 (2021): 274–279. DOI:10.1038/s41563-020-00833-z

arXiv: 2106.13773

Andy Goldschmidt et al 2021 New J. Phys. 23 033035

J. Kaidi, J. Parra-Martinez, and Y. Tachikawa, "Classification of String Theories via Topological Phases," Phys. Rev. Lett. 124 (2020) 121601, arXiv:1908.04805 [hep-th].

Low‐Frequency Tilt Seismology with a Precision Ground‐Rotation Sensor, M. P. Ross, K. Venkateswara, C. A. Hagedorn, J. H. Gundlach, J. S. Kissel, J. Warner, H. Radkins, T. J. Shaffer, M. W. Coughlin, P. Bodin. Seismological Research Letters ; 89 (1): 67–76.

GW170817: Observation of Gravitational Waves from a Binary Neutron Star Inspiral, B. P. Abbott et al. (LIGO Scientific Collaboration and Virgo Collaboration) Phys. Rev. Lett. 119, 161101

Multi-messenger Observations of a Binary Neutron Star Merger, B. P. Abbott et. al. The Astrophysical Journal Letters, Volume 848, Number 2.

MspA nanopore as a single-molecule tool: From sequencing to SPRNT. AH Laszlo, IM Derrington, JH Gundlach. Methods 105, 75-89

Decoding long nanopore sequencing reads of natural DNA. AH Laszlo, IM Derrington, BC Ross, H Brinkerhoff, A Adey, IC Nova, et al. Nature Biotechnology 32 (8), 829-833